miRBase entry: gga-mir-6654

Stem-loop gga-mir-6654


Accession
MI0022474
Description
Gallus gallus gga-mir-6654 precursor miRNA


Sequence

5 reads, 0 reads per million, 1 experiments
ucucaccucaccgccucccucugcugcuuucccugugcucagcgacggagccgcagcugugugagugcUCAGCACUGGGGCUGAGCUGGCAgggagggcagccccccauc
......................(((((((((((((((((((((..(((.((.(((.((.....)))))...)).)))..)))))))..))))))))))))))........

Structure
ucucaccucaccgccucccucu              --       ga   a  --c   g  g 
                      gcugcuuucccugu  gcucagc  cgg gc   gca cu u
                      ||||||||||||||  |||||||  ||| ||   ||| || g
                      cgacgggagggACG  CGAGUCG  GUC CG   cgu ga u
--------------cuaccccc              GU       GG   A  ACU   -  g 


Annotation confidence Not enough data
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Genome context
chr26: 2853093-2853202 [-]

Database links

Mature gga-miR-6654-3p

Accession MIMAT0025755
Description Gallus gallus gga-miR-6654-3p mature miRNA
Sequence 69 - UCAGCACUGGGGCUGAGCUGGCA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227