miRBase entry: gga-mir-3524b

Stem-loop gga-mir-3524b


Accession
MI0022472
Description
Gallus gallus gga-mir-3524b precursor miRNA


Sequence

20 reads, 7 reads per million, 3 experiments
ggguuggcuuuaagaucccuuccgaccuaagucauucuaugauucugugaugauaaagaaucacagaauCACAGAAUUGUGGGAUGGCUGagguuggaaggaaccuccug
(((((............(((((((((((.((((((((((((((((((((((................)))))))))))))))))))))).))))))))))))))))....

Structure
----     ggcuuuaagauc           a                      gauaaag 
    ggguu            ccuuccgaccu agucauucuaugauucugugau       a
    |||||            ||||||||||| ||||||||||||||||||||||        
    uccaa            ggaagguugga UCGGUAGGGUGUUAAGACACua       a
gucc     ------------           G                      agacacu 


Annotation confidence Not enough data
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Genome context
chr2: 95943670-95943779 [-]

Database links

Mature gga-miR-3524b-3p

Accession MIMAT0025753
Description Gallus gallus gga-miR-3524b-3p mature miRNA
Sequence 70 - CACAGAAUUGUGGGAUGGCUG - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227