miRBase entry: gga-mir-6632

Stem-loop gga-mir-6632


Accession
MI0022451
Description
Gallus gallus gga-mir-6632 precursor miRNA


Sequence

uaaccuggagguagcugaaAGAGAUGAGAGGAGUGGAUGACAGCuggagagaggucauucucuagcuccaacaucagucucccguaucuuuucaauccuguuucucuuug
......(((((.(((.((((((((((.(.((((..((((..(((((((((........)))))))))....))))...))))).))))))))...))..))))))))...

Structure
uaaccu     u   -u  ---        A A    -UG    --AC         gag 
      ggagg agc  ga   aAGAGAUG G GGAG   GAUG    AGCuggaga   g
      ||||| |||  ||   |||||||| | ||||   ||||    |||||||||    
      ucucu uug  cu   uuuucuau c ccuc   cuac    ucgaucucu   u
---guu     -   uc  aac        g -    uga    aacc         uac 


Annotation confidence Not enough data
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Genome context
chr4: 45143209-45143318 [+]

Database links

Mature gga-miR-6632-5p

Accession MIMAT0025728
Description Gallus gallus gga-miR-6632-5p mature miRNA
Sequence 20 - AGAGAUGAGAGGAGUGGAUGACAGC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227