miRBase entry: gga-mir-6588

Stem-loop gga-mir-6588


Accession
MI0022408
Description
Gallus gallus gga-mir-6588 precursor miRNA


Sequence

ggggcugagcagggagcuccugcccucagcugcucuuccacagccugagcugugucaccuccaacacaUUGCUGGGCUGGGGGAAGAGGAUuuucaguucuguuuccuuu
..(((((((((((.....)))))..)))))).(((((((.((((((.((((((((........)))))..)))))))))..)))))))......................

Structure
ggggcugagcagggagcuccugcccucagcug       -a      g   --     cac 
                                cucuucc  cagccu agc  ugugu   c
                                |||||||  |||||| |||  |||||    
                                GAGAAGG  GUCGGG UCG  acaca   u
----------uuuccuuugucuugacuuuUAG       GG      -   UU     acc 


Annotation confidence Not enough data
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Genome context
chr13: 17553409-17553518 [-]

Database links

Mature gga-miR-6588-3p

Accession MIMAT0025680
Description Gallus gallus gga-miR-6588-3p mature miRNA
Sequence 69 - UUGCUGGGCUGGGGGAAGAGGAU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227