miRBase entry: gga-mir-6581

Stem-loop gga-mir-6581


Accession
MI0022400
Description
Gallus gallus gga-mir-6581 precursor miRNA


Sequence

gaccccaucccgcugcagcgggagaguAGUGAGCUCAGAGGAGGACUGGGggaaagcagcccUGUCUCCCUGGUGGGCUUUUUgggaaguugaugcugagaa
...((((((((((....)))))).......(((((((.(((.((((.((((........)))))))).)))..)))))))..)))).(((....))).....

Structure
-------------gac    ucccgcugcagcgggagaguAGU       -G   A    U    gaa 
                ccca                       GAGCUCA  AGG GGAC GGGg   a
                ||||                       |||||||  ||| |||| ||||    
                gggU                       UUCGGGU  UCC UCUG Uccc   g
aagagucguaguugaa    ---------------------UU       GG   C    -    gac 


Annotation confidence Not enough data
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Genome context
chr1: 48389947-48390048 [-]

Database links

Mature gga-miR-6581-5p

Accession MIMAT0025669
Description Gallus gallus gga-miR-6581-5p mature miRNA
Sequence 28 - AGUGAGCUCAGAGGAGGACUGGG - 50
Evidence experimental
Illumina [1]

Mature gga-miR-6581-3p

Accession MIMAT0025670
Description Gallus gallus gga-miR-6581-3p mature miRNA
Sequence 63 - UGUCUCCCUGGUGGGCUUUUU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227