miRBase entry: bta-mir-6533

Stem-loop bta-mir-6533


Accession
MI0022334
Description
Bos taurus bta-mir-6533 precursor miRNA


Sequence

47 reads, 6 reads per million, 25 experiments
ucacgaacaaguuccugaugcuaccgcaucacgaacaaguuccugaUGCGGCAGAGCAUUAGAGAACaaguucugua
....((((..((((((((((((.((((((((.(((....))).))))))))...)))))))).))))..))))....

Structure
ucac    aa    -        --a        c   c 
    gaac  guuc cugaugcu   ccgcauca gaa a
    ||||  |||| ||||||||   |||||||| |||  
    cuug  CAAG GAUUACGA   GGCGUagu cuu a
augu    aa    A        GAC        c   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr28: 24980703-24980779 [-]

Database links

Mature bta-miR-6533

Accession MIMAT0025569
Description Bos taurus bta-miR-6533 mature miRNA
Sequence 47 - UGCGGCAGAGCAUUAGAGAAC - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026