miRBase entry: bta-mir-6529a

Stem-loop bta-mir-6529a


Accession
MI0022328
Description
Bos taurus bta-mir-6529a precursor miRNA
Gene family
MIPF0001771; mir-6529

Literature search
2 open access papers mention bta-mir-6529a
(4 sentences)

Sequence

10098 reads, 181 reads per million, 69 experiments
cuguucucuuGAGAGAUCAGAGGCGCAGAGUgcgucaaugucaaugaagccugugccuuuuaccucuuuaagagcgcac
.(((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).

Structure
c   u       -   AUC          AGU  g   au 
 ugu cucuuGA GAG   AGAGGCGCAG   gc uca  g
 ||| ||||||| |||   ||||||||||   || |||  u
 acg gagaauu cuc   uuuccguguc   cg agu  c
c   c       u   cau          ---  a   aa 


Annotation confidence High
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Genome context
chr1: 65675397-65675475 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-6529a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-6529a

Accession MIMAT0025565
Description Bos taurus bta-miR-6529a mature miRNA
Sequence 11 - GAGAGAUCAGAGGCGCAGAGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026