Stem-loop sequence bta-mir-2284aa-3

Accession

MI0022327 (change log)

Description

Bos taurus miR-2284aa-3 stem-loop

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284aa-3
(32 sentences)

Stem-loop

   -          a                    -    aag 
5'  uuggguugac aaaaaguuuguuuggguuuu cugu   a
    |||||||||| |||||||||||||||||||| ||||    
3'  aacccgacug uuuuucaagcaagccuaaaa ggua   u
   u          g                    a    gua 

Deep sequencing

10794 reads, 45.2 reads per million, 73 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr19: 29174040-29174119 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0022327

Mature sequence bta-miR-2284aa

• Accession: MIMAT0025560
• Sequence: 11 - aaaaaaguuuguuuggguuuu - 31
• Deep sequencing: 42697 reads, 73 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:bta-miR-2284aa

References

1. PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).