Stem-loop sequence bta-mir-2284z-3

AccessionMI0022325 (change log)
DescriptionBos taurus miR-2284z-3 stem-loop
Gene family MIPF0000747; mir-2284
Literature search

13 open access papers mention bta-mir-2284z-3
(32 sentences)

Stem-loop 
   -   u   aaaaa     uuu            c auaac 
5'  ggu ggc     aaaag   guuuggguuuuu c     a
    ||| |||     |||||   |||||||||||| |     u
3'  cca ccg     uuuuc   caaaccuaaaaa g     c
   c   c   ----c     ---            a acguu
Get sequence
Deep sequencing
10398 reads, 45.2 reads per million, 73 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr15: 54504475-54504549 [-]
sense
ENSBTAT00000061233 ; C2CD3-201; intron 35
ENSBTAT00000003775 ; C2CD3-202; intron 36
Database links

Mature sequence bta-miR-2284z

Accession MIMAT0025559
Sequence

11 -  

aaaaaaguuuguuuggguuuuu

 - 32

Get sequence
Deep sequencing73137 reads, 73 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).