miRBase entry: bta-mir-6528

Stem-loop bta-mir-6528


Accession
MI0022324
Description
Bos taurus bta-mir-6528 precursor miRNA


Sequence

6 reads, 3 reads per million, 4 experiments
cuaaagggagAGAGGGAAGAGGGAAGGAGGgauaacguaggaaagagaucucccuccuccuuccacccuggucucccuuccc
...((((((((.((((..((((((.(((((((..................)))))))))))))..))))..))))))))...

Structure
cua        -G    AA      A       uaacguag 
   aagggagA  AGGG  GAGGGA GGAGGga        g
   ||||||||  ||||  |||||| |||||||         
   uucccucu  uccc  cuuccu ccucccu        a
ccc        gg    ac      -       cuagagaa 


Annotation confidence Not enough data
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Genome context
chr15: 74896952-74897033 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-6528
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-6528

Accession MIMAT0025562
Description Bos taurus bta-miR-6528 mature miRNA
Sequence 11 - AGAGGGAAGAGGGAAGGAGG - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026