Stem-loop bta-mir-503

Accession

MI0022315

Description

Bos taurus bta-mir-503 precursor miRNA

Gene family

MIPF0000183; mir-503

Literature search

7 open access papers mention bta-mir-503
(29 sentences)

Sequence

12847 reads, 556 reads per million, 53 experiments

agccgugcccUAGCAGCGGGAACAGUACUGcagugggcaauuggugaucuGGAGUAUUGUUUCUGCUGCCCGGgcaagacugg
((.(.(((((..(((((((((((((((((.(((...((.....))...))).)))))))))))))))))..))))).).))..

Structure

--  c g     UA                 G   ugg  a 
  ag c ugccc  GCAGCGGGAACAGUACU cag   gc a
  || | |||||  ||||||||||||||||| |||   || u
  uc g acgGG  CGUCGUCUUUGUUAUGA Guc   ug u
gg  a a     CC                 G   uag  g 

Annotation confidence High

Genome context

chrX: 18288067-18288149 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-503

Mature bta-miR-503-5p

• Accession: MIMAT0025557
• Description: Bos taurus bta-miR-503-5p mature miRNA
• Sequence: 11 - UAGCAGCGGGAACAGUACUG - 30
• Evidence: experimental ; Illumina [1]

Mature bta-miR-503-3p

• Accession: MIMAT0025558
• Description: Bos taurus bta-miR-503-3p mature miRNA
• Sequence: 51 - GGAGUAUUGUUUCUGCUGCCCGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026