miRBase entry: bta-mir-2285n-5

Stem-loop bta-mir-2285n-5


Accession
MI0022310
Description
Bos taurus bta-mir-2285n-5 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285n-5
(15 sentences)

Sequence

17 reads, 1 reads per million, 11 experiments
uuggauuuggcccaaaaaguucauuugaguuuuuccuaagagcauauggAAAAACCCGAAUGAACUUUUGGgccaauccag
.((((((.(((((((((.(((((((((.((((((((...........)))))))).)))))))))))))))))))))))).

Structure
u      u         a         a        uaag 
 uggauu ggcccaaaa guucauuug guuuuucc    a
 |||||| ||||||||| ||||||||| ||||||||    g
 accuaa ccgGGUUUU CAAGUAAGC CAAAAAgg    c
g      -         -         C        uaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 102786395-102786475 [-]

Database links

Mature bta-miR-2285n

Accession MIMAT0025531
Description Bos taurus bta-miR-2285n mature miRNA
Sequence 50 - AAAAACCCGAAUGAACUUUUGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026