miRBase entry: bta-mir-2285m-5

Stem-loop bta-mir-2285m-5


Accession
MI0022309
Description
Bos taurus bta-mir-2285m-5 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285m-5
(15 sentences)

Sequence

17 reads, 4 reads per million, 15 experiments
uauugguuuggccaaaaagugcauugggauuuuugcauaaagcuuacagAAAACGCAAAUGAACUUUUUGGccaacuugau
....((((.(((((((((((.(((((.(.((((((...........)))))).).).)))).)))))))))))))))....

Structure
uauu    u           g    - g a      caua 
    gguu ggccaaaaagu cauu g g uuuuug    a
    |||| ||||||||||| |||| | | ||||||    a
    ucaa ccGGUUUUUCA GUAA C C AAAgac    g
uagu    -           A    A G A      auuc 


Annotation confidence Not enough data
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Genome context
chr8: 13168314-13168394 [+]

Database links

Mature bta-miR-2285m

Accession MIMAT0025533
Description Bos taurus bta-miR-2285m mature miRNA
Sequence 50 - AAAACGCAAAUGAACUUUUUGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026