miRBase entry: bta-mir-2284y-5

Stem-loop bta-mir-2284y-5


Accession
MI0022303
Description
Bos taurus bta-mir-2284y-5 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284y-5
(33 sentences)

Sequence

5423 reads, 299 reads per million, 67 experiments
guguuggccaAAAAGUUCGUUCGGGUUUUUCuguacauuuauuuaaaagcccaaacagaaaaccucaaaugaaauuucuggccaacuca
(.((((((((.(((.((((((.(((.((((((((....................)))))))).))).)))))).))).)))))))).).

Structure
- u        A   G      C   U        acauuuauu 
 g guuggcca AAA UUCGUU GGG UUUUCugu         u
 | |||||||| ||| |||||| ||| ||||||||          
 c caaccggu uuu aaguaa cuc aaaagaca         a
a u        c   a      a   c        aacccgaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 111514014-111514102 [+]

Database links

Mature bta-miR-2284y

Accession MIMAT0024579
Description Bos taurus bta-miR-2284y mature miRNA
Sequence 11 - AAAAGUUCGUUCGGGUUUUUC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026