miRBase entry: bta-mir-2284y-4

Stem-loop bta-mir-2284y-4


Accession
MI0022300
Description
Bos taurus bta-mir-2284y-4 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284y-4
(33 sentences)

Sequence

5443 reads, 268 reads per million, 68 experiments
aggugggcccAAAAGUUCGUUCGGGUUUUUCcauaccaucuuacagaaaaacccaaacaaauuuuuuggcccaccua
(((((((((.(((((((.(((.(((((((((..((......))..))))))))).))).))))))).))))))))).

Structure
-         c       C   C         ca  cc 
 aggugggcc AAAAGUU GUU GGGUUUUUC  ua  a
 ||||||||| ||||||| ||| |||||||||  ||   
 uccacccgg uuuuuaa caa cccaaaaag  au  u
a         u       a   a         ac  uc 


Annotation confidence Not enough data
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Genome context
chr24: 33986933-33987009 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2284y-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2284y

Accession MIMAT0024579
Description Bos taurus bta-miR-2284y mature miRNA
Sequence 11 - AAAAGUUCGUUCGGGUUUUUC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026