Stem-loop sequence bta-mir-2284y-4

AccessionMI0022300 (change log)
DescriptionBos taurus miR-2284y-4 stem-loop
Gene family MIPF0000747; mir-2284
Literature search

13 open access papers mention bta-mir-2284y-4
(33 sentences)

Stem-loop 
   -         c       c   c         ca  cc 
5'  aggugggcc aaaaguu guu ggguuuuuc  ua  a
    ||||||||| ||||||| ||| |||||||||  ||   
3'  uccacccgg uuuuuaa caa cccaaaaag  au  u
   a         u       a   a         ac  uc
Get sequence
Deep sequencing
64012 reads, 404 reads per million, 77 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr24: 33986933-33987009 [-]
sense
ENSBTAT00000008875 ; RBBP8-201; intron 14
Clustered miRNAs
< 10kb from bta-mir-2284y-4
bta-mir-2284y-4chr24: 33986933-33987009 [-]
bta-mir-2285o-3chr24: 33986931-33987011 [+]
Database links

Mature sequence bta-miR-2284y

Accession MIMAT0024579
Sequence

11 -  

aaaaguucguucggguuuuuc

 - 31

Get sequence
Deep sequencing491587 reads, 77 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).