miRBase entry: bta-mir-378c

Stem-loop bta-mir-378c


Accession
MI0022299
Description
Bos taurus bta-mir-378c precursor miRNA

Literature search
24 open access papers mention bta-mir-378c
(103 sentences)

Sequence

149070 reads, 749 reads per million, 70 experiments
caaaaccaccACUGGACUUGGAGUCAGAAGUuccaugugugagucuugguagggccaguggauugcuaa
........((((((((((.(((.(((.(.........).))).))).)))....)))))))........

Structure
caaaacca       ----   U   G   G AGU 
        ccACUGG    ACU GGA UCA A   u
        |||||||    ||| ||| ||| |   c
        ggugacc    ugg ucu agu u   c
aaucguua       ggga   u   g   g gua 


Annotation confidence Not enough data
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Genome context
chr24: 31823795-31823863 [-]

Database links

Mature bta-miR-378c

Accession MIMAT0025551
Description Bos taurus bta-miR-378c mature miRNA
Sequence 11 - ACUGGACUUGGAGUCAGAAGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026