miRBase entry: bta-mir-2285p

Stem-loop bta-mir-2285p


Accession
MI0022274
Description
Bos taurus bta-mir-2285p precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285p
(15 sentences)

Sequence

109 reads, 15 reads per million, 50 experiments
acuggguuggccaaauuguucauuuggguuuuuccguaacaucuuauggAAAAACUUGAGUGAACUUUUGGgucagcccag
.(((((((((((.((..((((((((((((((((((((((....))))))))))))))))))))))..)).)))))))))))

Structure
a           a  uu                      c 
 cuggguuggcc aa  guucauuuggguuuuuccguaa a
 ||||||||||| ||  ||||||||||||||||||||||  
 gacccgacugG UU  CAAGUGAGUUCAAAAAgguauu u
-           G  UU                      c 


Annotation confidence High
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Genome context
chr13: 36776800-36776880 [+]

Database links

Mature bta-miR-2285p

Accession MIMAT0025532
Description Bos taurus bta-miR-2285p mature miRNA
Sequence 50 - AAAAACUUGAGUGAACUUUUGG - 71
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026

  2. PubMed ID: 23100578
    Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
    "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
    "J Anim Sci (2013) 91:90-103