miRBase entry: bta-mir-2285n-1

Stem-loop bta-mir-2285n-1


Accession
MI0022272
Description
Bos taurus bta-mir-2285n-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285n-1
(15 sentences)

Sequence

23 reads, 5 reads per million, 15 experiments
cacuggguuagccaaaaaguucgucccgguguuuccauaagauguaacggAAAAACCCGAAUGAACUUUUGGccaacccagu
.((((((((.(((((((.((((((.(.(((.(((((............))))).))).).))))))))))))).))))))))

Structure
c        a       a      c c   g     auaag 
 acuggguu gccaaaa guucgu c ggu uuucc     a
 |||||||| ||||||| |||||| | ||| |||||      
 ugacccaa cGGUUUU CAAGUA G CCA AAAgg     u
-        c       -      A C   A     caaug 


Annotation confidence Not enough data
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Genome context
chr12: 80695473-80695554 [-]

Database links

Mature bta-miR-2285n

Accession MIMAT0025531
Description Bos taurus bta-miR-2285n mature miRNA
Sequence 51 - AAAAACCCGAAUGAACUUUUGG - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026