Stem-loop hpa-MIR171a

Accession

MI0022245

Description

Helianthus paradoxus hpa-MIR171a precursor miRNA

Gene family

MIPF0000030; MIR171_1

Sequence

ugagggggagcuguugaacgagauguugguucgguucaauaagaacucaacguucaaauagugcauugaacguugcuuuuUGAUUGAGCCGUGCCAAUAUCacgugcauguugcu
.....((.((((((...(((.(((((((((.(((((((((.((((..((((((((((........))))))))))..)))).))))))))).))))))))).)))))).))).))

Structure

ugagg  g   -   uga   a         u         a    cu          aua 
     gg agc ugu   acg gauguuggu cgguucaau agaa  caacguucaa   g
     || ||| |||   ||| ||||||||| ||||||||| ||||  ||||||||||    
     uc uug acg   ugc CUAUAACCG GCCGAGUUA Uuuu  guugcaaguu   u
-----  g   u   ---   a         U         G    uc          acg 

Annotation confidence Not enough data

Genome context

Unknown

Mature hpa-miR171a

• Accession: MIMAT0025505
• Description: Helianthus paradoxus hpa-miR171a mature miRNA
• Sequence: 81 - UGAUUGAGCCGUGCCAAUAUC - 101
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532