Stem-loop sequence tgu-mir-1467-1

Accession

MI0022176 (change log)

Previous IDs

tgu-mir-1467

Description

Taeniopygia guttata miR-1467-1 stem-loop

Gene family

MIPF0001416; mir-1467

Stem-loop

   ca  g        u       c   a  -     a    -   a ca 
5'   gg cagguuuu uucucag uac uc ggugu aauc cag g  a
     || |||||||| ||||||| ||| || ||||| |||| ||| |   
3'   cc gucuaaga gagaguc aug ag ccaca uuag guc c  c
   aa  g        c       a   -  a     c    a   a cu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (taeGlu3.2.4): chr2: 142442502-142442594 [-]
• Overlapping transcripts:

  sense

  ENSTGUT00000012843 ; EXT1-201; intron 1

  ENSTGUT00000018672 ; tgu-mir-1467-201; exon 1

Database links

• miRBase Tracker:MI0022176

Mature sequence tgu-miR-1467-5p

• Accession: MIMAT0025399
• Sequence: 15 - uucucagcuacaucgguguaaauc - 38
• Evidence: experimental; Illumina [2]

Mature sequence tgu-miR-1467-3p

• Accession: MIMAT0027342
• Sequence: 58 - uucacaccagaguaacugagagc - 80
• Evidence: experimental; Illumina [2]

References

1. PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).
2. PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).