miRBase entry: ssc-mir-2483

Stem-loop ssc-mir-2483


Accession
MI0022167
Description
Sus scrofa ssc-mir-2483 precursor miRNA
Gene family
MIPF0001532; mir-2483

Literature search
3 open access papers mention ssc-mir-2483
(6 sentences)

Sequence

9 reads, 13 reads per million, 6 experiments
ugaaaaguuccgucaaccauccagcuguuuggggugaugcaaacAAACAUCUGGUUGGUUGAGAGAauuuuuuacu
((((((((((..(((((((.((((.((((((............)))))).)))).)))))))..))))))))))..

Structure
--          cg       u    c      gggug 
  ugaaaaguuc  ucaacca ccag uguuug     a
  ||||||||||  ||||||| |||| ||||||      
  auuuuuuaAG  AGUUGGU GGUC ACAAAc     u
uc          AG       U    U      aaacg 


Annotation confidence Not enough data
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Genome context
chrX: 117608201-117608276 [-]

Database links

Mature ssc-miR-2483

Accession MIMAT0025390
Description Sus scrofa ssc-miR-2483 mature miRNA
Sequence 45 - AAACAUCUGGUUGGUUGAGAGA - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328