Stem-loop sequence ssc-mir-2366-1

Accession

MI0022162 (change log)

Description

Sus scrofa miR-2366-1 stem-loop

Gene family

MIPF0001403; mir-2366

Literature search

3 open access papers mention ssc-mir-2366-1
(3 sentences)

Stem-loop

   gc    g    a  gu     ug    a c     aaa agg 
5'   ccug cccc gg  ccucu  ucug g cccag   g   a
     |||| |||| ||  |||||  |||| | |||||   |   g
3'   ggac gggg uc  ggaga  agac c ggguc   c   a
   uu    a    g  ug     --    a u     --g gag 

Deep sequencing

2 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Sscrofa10.2; GCA_000003025.4): chr1: 142775297-142775379 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0022162

Mature sequence ssc-miR-2366

• Accession: MIMAT0025388
• Sequence: 52 - ugggucacagaagagggucugg - 73
• Deep sequencing: 4 reads, 2 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).