Stem-loop sequence ssc-mir-1249-1

AccessionMI0022158 (change log)
DescriptionSus scrofa miR-1249-1 stem-loop
Gene family MIPF0000667; mir-1249
Literature search

2 open access papers mention ssc-mir-1249-1
(2 sentences)

Stem-loop 
   u      a    -        a  a  u    caa     cuc 
5'  guuugc uggg gaggaggg gg ga gggc   guucc   u
    |||||| |||| |||||||| || || ||||   |||||    
3'  caagcg aucc cuucuucc cc cu cccg   caagg   g
   -      -    a        c  c  u    ---     ucc
Get sequence
Deep sequencing
64 reads, 0 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr5: 1499712-1499793 [+]
sense
ENSSSCT00000025794 ; ssc-mir-1249-2.2-201; exon 1
Database links

Mature sequence ssc-miR-1249

Accession MIMAT0025385
Sequence

51 -  

acgcccuucccccccuucuuca

 - 72

Get sequence
Deep sequencing126 reads, 13 experiments
Evidence experimental; Illumina [1]

References

1
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).