miRBase entry: ssc-mir-874

Stem-loop ssc-mir-874


Accession
MI0022157
Description
Sus scrofa ssc-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874


Sequence

20 reads, 27 reads per million, 6 experiments
ugguguuagcccugcggccccacgcaccaggguaagagagacucucgcuucCUGCCCUGGCCCGAGGGACCGACuggcugggcc
.(((..(((((...(((.(((.((..((((((((((.(((...))).))...))))))))..)).))).)))...))))).)))

Structure
u   gu     cug   c   a  ca        ---  a   a 
 ggu  uagcc   cgg ccc cg  ccagggua   ag gag  
 |||  |||||   ||| ||| ||  ||||||||   || ||| c
 ccg  gucgg   GCC GGG GC  GGUCCCGU   uc cuc  
-   -g     uCA   A   A  CC        Ccu  g   u 


Annotation confidence Not enough data
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Genome context
chr2: 145381098-145381181 [-]

Database links

Mature ssc-miR-874

Accession MIMAT0025384
Description Sus scrofa ssc-miR-874 mature miRNA
Sequence 52 - CUGCCCUGGCCCGAGGGACCGAC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328