miRBase entry: ssc-mir-551a

Stem-loop ssc-mir-551a


Accession
MI0022153
Description
Sus scrofa ssc-mir-551a precursor miRNA
Gene family
MIPF0000360; mir-551

Literature search
1 open access papers mention ssc-mir-551a
(1 sentences)

Sequence

1 reads, 1 reads per million, 1 experiments
uggugacccuggaaauccagagcgggugaggccugucugacuguuucuagGCGACCCACUCUUGGUUUCCaugguugccc
.(((((((.((((((((.((((.((((...(((((............))))).)))).)))).)))))))).))))))).

Structure
u       c        c    c    gag     ucuga 
 ggugacc uggaaauc agag gggu   gccug     c
 ||||||| |||||||| |||| ||||   |||||      
 ccguugg aCCUUUGG UCUC CCCA   CGgau     u
c       u        U    A    --G     cuuug 


Annotation confidence Not enough data
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Genome context
chr6: 59927697-59927776 [+]

Database links

Mature ssc-miR-551a

Accession MIMAT0025379
Description Sus scrofa ssc-miR-551a mature miRNA
Sequence 51 - GCGACCCACUCUUGGUUUCC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328