Stem-loop sequence ssc-mir-490-2

Accession

MI0022151 (change log)

Description

Sus scrofa miR-490-2 stem-loop

Gene family

MIPF0000229; mir-490

Literature search

2 open access papers mention ssc-mir-490-2
(2 sentences)

Stem-loop

   cauu        c      -   -      g   cac   u 
5'     guucgaca caugga ucc ccaggu ggu   guu c
       |||||||| |||||| ||| |||||| |||   |||  
3'     cgaguugu guaccu agg ggucca cca   uag a
   uugu        c      c   a      a   -ca   a 

Deep sequencing

73 reads, 0 reads per million, 11 experiments

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0022151

Mature sequence ssc-miR-490

• Accession: MIMAT0025376
• Sequence: 50 - caaccuggaggacuccaugcug - 71
• Deep sequencing: 68 reads, 11 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).