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miRBase |
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Stem-loop sequence ssc-mir-194a |
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Accession | MI0022137 (change log) | |||||
Description | Sus scrofa miR-194a stem-loop | |||||
Gene family | MIPF0000055; mir-194 | |||||
Literature search |
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11 open access papers mention ssc-mir-194a | |||||
Stem-loop |
ug cu a g g c 5' ccacccc guaacagca cuccau uggaa ug c ||||||| ||||||||| |||||| ||||| || c 3' ggugggg uauugucgu ggggug accuu au a gg uc c - g c |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ssc-miR-194a-5p |
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Accession | MIMAT0025368 |
Sequence |
11 - uguaacagcaacuccaugugg - 31 |
Deep sequencing | 49 reads, 11 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence ssc-miR-194a-3p |
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Accession | MIMAT0037465 |
Sequence |
47 - ccaguggggcugcuguuaucu - 67 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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2 |
PMID:25230983
"The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing"
J Appl Genet. 56:239-252(2015).
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