Stem-loop sequence ssc-mir-138

AccessionMI0022131 (change log)
DescriptionSus scrofa miR-138 stem-loop
Gene family MIPF0000075; mir-138
Literature search

5 open access papers mention ssc-mir-138
(8 sentences)

Stem-loop 
   - c       ----cag             uca       gc a 
5'  g ggugggg       cugguguugugaa   ggccguu  c a
    | |||||||       |||||||||||||   |||||||  | u
3'  c ccacccc       gaccacaacacuu   ucggcaa  g c
   a a       acacugg             -ca       ga a
Get sequence
Deep sequencing
8 reads, 0 reads per million, 4 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr13: 30329402-30329486 [+]
intergenic
Database links

Mature sequence ssc-miR-138

Accession MIMAT0025363
Sequence

11 -  

agcugguguugugaaucaggc

 - 31

Get sequence
Deep sequencing8 reads, 4 experiments
Evidence experimental; Illumina [1]

References

1
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).