Stem-loop sequence ssc-mir-34c-2

Accession

MI0022128 (change log)

Description

Sus scrofa miR-34c-2 stem-loop

Gene family

MIPF0000039; mir-34

Literature search

11 open access papers mention ssc-mir-34c-2
(132 sentences)

Stem-loop

   -   ag     a   a    a     c      c ga 
5'  ucu  uuacu ggc gugu guuag ugauug u  u
    |||  ||||| ||| |||| ||||| |||||| |   
3'  aga  aaugg ccg caca caauc acuaac a  a
   u   aa     a   g    c     -      c aa 

Deep sequencing

33462 reads, 9.4e+03 reads per million, 14 experiments

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0022128

Mature sequence ssc-miR-34c

• Accession: MIMAT0013916
• Sequence: 11 - aggcaguguaguuagcugauugc - 33
• Deep sequencing: 65820 reads, 14 experiments
• Evidence: experimental; Illumina [1-2]

References

1. PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).
2. PMID:24499489 "Exploration of microRNAs in porcine milk exosomes" Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL BMC Genomics. 15:100(2014).