Stem-loop pde-MIR482c

Accession

MI0022099

Description

Pinus densata pde-MIR482c precursor miRNA

Gene family

MIPF0000403; MIR482

Literature search

1 open access papers mention pde-MIR482c
(3 sentences)

Sequence

aaggccaauGGCUUGCGAGGGUAGGAAAAGcucagugugaugauauauuucucgcucacugaucugcaguuuuucccacuccucccaagcccauggcc
..(((((..((((((.((((((.((((((((((((.(((((((........))).))))....))).))))))))).)).)))).))))))..)))))

Structure

aa     au      C    -  A         -   ---u    -   uau 
  ggcca  GGCUUG GAGG GU GGAAAAGcu cag    guga uga   a
  |||||  |||||| |||| || ||||||||| |||    |||| |||    
  ccggu  ccgaac cucc ca ccuuuuuga guc    cacu gcu   u
--     ac      c    u  c         c   uagu    c   cuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR482c

• Accession: MIMAT0025335
• Description: Pinus densata pde-miR482c mature miRNA
• Sequence: 10 - GGCUUGCGAGGGUAGGAAAAG - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132