miRBase entry: ptc-MIR6426b

Stem-loop ptc-MIR6426b


Accession
MI0022031
Description
Populus trichocarpa ptc-MIR6426b precursor miRNA
Gene family
MIPF0001561; MIR6426


Sequence

cgcguuuuuucuucuucuucuucugcacuuccaugucucuauuguucacgugaacaGUGGAGACAUGGAAGUGAAGAagaagaagaagaaggagaaug
....((((((((((((((((((((.((((((((((((((((((((((....)))))))))))))))))))))).))))))))))))))))))))....

Structure
cgcg                    g                      a 
    uuuuuucuucuucuucuucu cacuuccaugucucuauuguuc c
    |||||||||||||||||||| ||||||||||||||||||||||  
    gaggaagaagaagaagaAGA GUGAAGGUACAGAGGUGacaag g
guaa                    A                      u 


Annotation confidence Not enough data
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Genome context
CM000352.2: 11016524-11016621 [-]

Database links

Mature ptc-miR6426b

Accession MIMAT0025259
Description Populus trichocarpa ptc-miR6426b mature miRNA
Sequence 57 - GUGGAGACAUGGAAGUGAAGA - 77
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034