miRBase entry: ptc-MIR6451

Stem-loop ptc-MIR6451


Accession
MI0022027
Description
Populus trichocarpa ptc-MIR6451 precursor miRNA


Sequence

cauuaucauuuguaauauccauauuaucugauuuugacgggucAUGUCAGAUCAUGUUAGGUAUuucauaugauuuug
((..(((((.((.((((((.((((.(((((((..(((....))).))))))).))))..)))))).)).)))))..))

Structure
  uu     u  u      -c    u       uu   c 
ca  aucau ug aauauc  auau aucugau  uga g
||  ||||| || ||||||  |||| |||||||  |||  
gu  uagua ac uUAUGG  UGUA UAGACUG  Acu g
  uu     u  u      AU    C       -U   g 


Annotation confidence Not enough data
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Genome context
CM000351.2: 4712971-4713048 [+]

Database links

Mature ptc-miR6451

Accession MIMAT0025255
Description Populus trichocarpa ptc-miR6451 mature miRNA
Sequence 44 - AUGUCAGAUCAUGUUAGGUAU - 64
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034