miRBase entry: ptc-MIR6431

Stem-loop ptc-MIR6431


Accession
MI0022005
Description
Populus trichocarpa ptc-MIR6431 precursor miRNA


Sequence

gauuuugauucuuUUAUGUGGCAUAAAAGAAUCAAaaucgaguuggaaucuaccaauuugauuuugauucuuuuaugcccauaauaaaaucaacgguc
((((((((((...(((((.(((((((((((((((((((((((((((......))))))))))))))))))))))))))))))))...)))))).))))

Structure
    -      cuu     U                           aa 
gauu uugauu   UUAUG GGCAUAAAAGAAUCAAaaucgaguugg  u
|||| ||||||   ||||| |||||||||||||||||||||||||||   
cugg aacuaa   aauac ccguauuuucuuaguuuuaguuuaacc  c
    c      aau     -                           au 


Annotation confidence Not enough data
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Genome context
CM000337.2: 47209776-47209873 [-]

Database links

Mature ptc-miR6431

Accession MIMAT0025232
Description Populus trichocarpa ptc-miR6431 mature miRNA
Sequence 14 - UUAUGUGGCAUAAAAGAAUCAA - 35
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034