miRBase entry: ptc-MIR6426a

Stem-loop ptc-MIR6426a


Accession
MI0021995
Description
Populus trichocarpa ptc-MIR6426a precursor miRNA
Gene family
MIPF0001561; MIR6426


Sequence

uuuuuucuucuucuucugcacuuccaugucuccacuguucacgugaacaGUGGAGACAUGGAAGUGAAGAagaaggagaaugag
....(((((((((((((.((((((((((((((((((((((....)))))))))))))))))))))).)))))))))))))....

Structure
uuuu             g                      a 
    uucuucuucuucu cacuuccaugucuccacuguuc c
    ||||||||||||| ||||||||||||||||||||||  
    aagaggaagaAGA GUGAAGGUACAGAGGUGacaag g
gagu             A                      u 


Annotation confidence Not enough data
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Genome context
CM000337.2: 22403644-22403727 [-]

Database links

Mature ptc-miR6426a

Accession MIMAT0025221
Description Populus trichocarpa ptc-miR6426a mature miRNA
Sequence 50 - GUGGAGACAUGGAAGUGAAGA - 70
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034