miRBase entry: mmu-mir-30f

Stem-loop mmu-mir-30f


Accession
MI0021961
Symbol
MGI: Mir30f
Description
Mus musculus mmu-mir-30f precursor miRNA

Literature search
161 open access papers mention mmu-mir-30f
(771 sentences)

Sequence

2842572 reads, 0 reads per million, 107 experiments
uggcagccugccgcuGUAAACAUCCGACUGAAAGCUCcucucaacaccuuacagcuuccagucaaggauguuuacaguagcaaagacugccc
.((((((.(((.((((((((((((((((((.(((((................))))).)))))..))))))))))))).)))..).))))).

Structure
u     - -c   c             --     A     Ccucuca 
 ggcag c  ugc gcuGUAAACAUCC  GACUG AAGCU       a
 ||||| |  ||| |||||||||||||  ||||| |||||        
 ccguc g  acg ugacauuuguagg  cugac uucga       c
c     a aa   a             aa     c     cauucca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 120772606-120772697 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mmu-mir-30f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-30f

Accession MIMAT0025179
Description Mus musculus mmu-miR-30f mature miRNA
Sequence 16 - GUAAACAUCCGACUGAAAGCUC - 37
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22319597
    Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
    Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
    PLoS One (2012) 7:e30933