Stem-loop mmu-mir-6340

Accession

MI0021868

Symbol

MGI: Mir6340

Description

Mus musculus mmu-mir-6340 precursor miRNA

Literature search

1 open access papers mention mmu-mir-6340
(2 sentences)

Sequence

17 reads, 0 reads per million, 10 experiments

cuucuuccucaaggucaggcccugggucGUCAGCAGCAGCUUCGCUUUGGCuccgauggcugucuucggaguuugaagcccuugccgccagacgcuggguuggcaucaguggauggaau
.(((.(((.(...(((((.(((.(.(((....((.(((((((((....((((((((.(.....).))))))))))))))...))).))..))).).))))))))....).))).)))..

Structure

-c   u   u -aag     g   u g   GUCA  A   ---      CUUU        u g 
  uuc ucc c    gucag ccc g guc    GC GCA   GCUUCG    GGCuccga g c
  ||| ||| |    ||||| ||| | |||    || |||   ||||||    |||||||| | u
  agg agg g    cgguu ggg c cag    cg cgu   cgaagu    uugaggcu c g
ua   u   u acua     -   u g   --ac  c   ucc      ----        u u 

Annotation confidence Not enough data

Genome context

chr2: 173701030-173701148 [-]

Mature mmu-miR-6340

• Accession: MIMAT0025083
• Description: Mus musculus mmu-miR-6340 mature miRNA
• Sequence: 29 - GUCAGCAGCAGCUUCGCUUUGGC - 51
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22319597
   Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
   Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
   PLoS One (2012) 7:e30933