Stem-loop rno-mir-6334

Accession

MI0021860

Description

Rattus norvegicus rno-mir-6334 precursor miRNA

Sequence

8 reads, 1 reads per million, 8 experiments

cuucugucacccuggaagcagacucgggaaacagccuaagcacuguaaucacuagugCCAGGCUCUCCCAGCUGCCGGCuugggaucugaugggaagcc
.(((((((((((.((..((((.((.((((...(((((..((((((.......)))))).))))).))))))))))...)).)))...))))))))....

Structure

---c        ---   u  -aa    a  c    aac     aa      ua 
    uucuguca   ccc gg   gcag cu ggga   agccu  gcacug  a
    ||||||||   ||| ||   |||| || ||||   |||||  ||||||  u
    aggguagu   ggg uC   CGUC GA CCCU   UCGGA  Cgugau  c
ccga        cua   u  GGC    -  -    --C     -C      ca 

Annotation confidence Not enough data

Genome context

chr3: 150911586-150911684 [-]

Mature rno-miR-6334

• Accession: MIMAT0025075
• Description: Rattus norvegicus rno-miR-6334 mature miRNA
• Sequence: 58 - CCAGGCUCUCCCAGCUGCCGGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324