miRBase entry: rno-mir-6329

Stem-loop rno-mir-6329


Accession
MI0021853
Description
Rattus norvegicus rno-mir-6329 precursor miRNA


Sequence

14444 reads, 40 reads per million, 475 experiments
aaggugacaguuugcAAUGUGACUCAGCUAUCUGAACAgucaccccaaugucagacagcugagucacucugcaaauugucacccaaugcuu
..((((((((((((((..(((((((((((.(((((.((..........))))))).)))))))))))..))))))))))))))........

Structure
------aa              AU           A     A  guca 
        ggugacaguuugcA  GUGACUCAGCU UCUGA CA    c
        ||||||||||||||  ||||||||||| ||||| ||     
        ccacuguuaaacgu  cacugagucga agacu gu    c
uucguaac              cu           c     -  aacc 


Annotation confidence High
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Genome context
chr8: 56629595-56629685 [-]

Database links

Mature rno-miR-6329

Accession MIMAT0025068
Description Rattus norvegicus rno-miR-6329 mature miRNA
Sequence 16 - AAUGUGACUCAGCUAUCUGAACA - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22605339
    Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
    "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
    "J Biol Chem (2012) 287:24397-24411

  2. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324