Stem-loop sequence rno-mir-6327

AccessionMI0021851 (change log)
DescriptionRattus norvegicus miR-6327 stem-loop
   -a  ag   ---     g  ---        ac   -a   u   c  c  ug          c  cu    a 
5'   ga  aca   cagag ag   ccucgguc  agc  ugg aga ug ga  ucuguagucc gg  gggc g
     ||  |||   ||||| ||   ||||||||  |||  ||| ||| || ||  |||||||||| ||  |||| g
3'   cu  ugu   gucuu uc   ggagucgg  ucg  acc ucu ac cu  agaugucagg cc  ucug a
   ca  cg   uca     g  uga        -a   ac   c   -  -  --          -  --    a 
Get sequence
Deep sequencing
8 reads, 0 reads per million, 7 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr10: 68977601-68977733 [-]
Database links

Mature sequence rno-miR-6327

Accession MIMAT0025066

75 - 


 - 93

Get sequence
Evidence experimental; Illumina [1]
Predicted targets


PMID:22605339 "Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum" Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T J Biol Chem. 287:24397-24411(2012).
PMID:22908386 "MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase" Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC J Biol Chem. 287:25312-25324(2012).