miRBase entry: rno-mir-344g

Stem-loop rno-mir-344g


Accession
MI0021837
Description
Rattus norvegicus rno-mir-344g precursor miRNA
Gene family
MIPF0000267; mir-344

Literature search
7 open access papers mention rno-mir-344g
(16 sentences)

Sequence

192 reads, 8 reads per million, 48 experiments
aauuucugucAGUCAGGCUCCUGGCAGGAGUCcagcucucagcugguuccaggcucuagccaggggcuugacugcaagc
......((.((((((((((((((((.(((((((((((...))))))......))))).))))))))))))))))))...

Structure
aauuuc  u                A     ------      c 
      ug cAGUCAGGCUCCUGGC GGAGU      Ccagcu  
      || |||||||||||||||| |||||      |||||| u
      ac gucaguucggggaccg ucucg      ggucga  
---cga  -                a     gaccuu      c 


Annotation confidence High
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Genome context
chr1: 122409917-122409995 [-]

Database links

Mature rno-miR-344g

Accession MIMAT0025052
Description Rattus norvegicus rno-miR-344g mature miRNA
Sequence 11 - AGUCAGGCUCCUGGCAGGAGUC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22605339
    Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
    "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
    "J Biol Chem (2012) 287:24397-24411

  2. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324