miRBase entry: rno-mir-344i

Stem-loop rno-mir-344i


Accession
MI0021834
Description
Rattus norvegicus rno-mir-344i precursor miRNA
Gene family
MIPF0000267; mir-344

Literature search
7 open access papers mention rno-mir-344i
(16 sentences)

Sequence

389 reads, 12 reads per million, 71 experiments
acagggcuuuugcaagucaggcuccuggcuggaguccagcucuaagcuggauccaggCUCUAGCCAGGGCUUGACUGCAcucugcucaauagagaaggg
.(((((....((((.(((((((.((((((((((((((((((...))))))......))))))))))))))))))))))))))))(((....))).....

Structure
--------------a     cuuu    a       u            ------      c 
               caggg    ugca gucaggc ccuggcuggagu      ccagcu  
               |||||    |||| ||||||| ||||||||||||      |||||| u
               gucuc    ACGU CAGUUCG GGACCGAUCUCg      ggucga  
gggaagagauaacuc     ----    -       -            gaccua      a 


Annotation confidence Not enough data
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Genome context
chr1: 122506559-122506657 [-]

Database links

Mature rno-miR-344i

Accession MIMAT0025049
Description Rattus norvegicus rno-miR-344i mature miRNA
Sequence 58 - CUCUAGCCAGGGCUUGACUGCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22605339
    Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
    "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
    "J Biol Chem (2012) 287:24397-24411

  2. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324