Stem-loop sequence rno-mir-509

AccessionMI0021536 (change log)
DescriptionRattus norvegicus miR-509 stem-loop
Gene family MIPF0000130; mir-506
Literature search

1 open access papers mention rno-mir-509
(4 sentences)

Stem-loop 
   c        guu       c    a    g       gcaua 
5'  ugugugug   cuuuacu caga uaug caaucau     a
    ||||||||   ||||||| |||| |||| |||||||      
3'  acguacac   gagguga gucu guac guuagug     u
   a        aau       c    -    a       uaaau
Get sequence
Deep sequencing
1099 reads, 7.14 reads per million, 112 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chrX: 155317206-155317290 [+]
intergenic
Database links

Mature sequence rno-miR-509-5p

Accession MIMAT0024849
Sequence

16 -  

uacuccagaauauggcaaucaug

 - 38

Get sequence
Deep sequencing614 reads, 84 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence rno-miR-509-3p

Accession MIMAT0024850
Sequence

51 -  

ugauugacaugucugcagugga

 - 72

Get sequence
Deep sequencing484 reads, 83 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:22470567 "Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation" Meng F, Hackenberg M, Li Z, Yan J, Chen T PLoS One. 7:e34394(2012).