Stem-loop hvu-MIR5049e

Accession

MI0021516

Description

Hordeum vulgare hvu-MIR5049e precursor miRNA

Gene family

MIPF0001200; MIR5067

Literature search

2 open access papers mention hvu-MIR5049e
(4 sentences)

Sequence

aucuauuuacuuccuccgucccuaaauaauuguaguuagagagaauaguuuaguucuuuccaacuacAAUUAUUUAGGUACAGAGGGAguauguagga
..((((.(((((((((.((.(((((((((((((((((.((((((((......)))))))).))))))))))))))))).)).))))))))).))))..

Structure

au    u         c  c                 a        ag 
  cuau uacuuccuc gu ccuaaauaauuguaguu gagagaau  u
  |||| ||||||||| || ||||||||||||||||| ||||||||   
  gaug augAGGGAG CA GGAUUUAUUAAcaucaa cuuucuug  u
ag    u         A  U                 c        au 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5049e

• Accession: MIMAT0024826
• Description: Hordeum vulgare hvu-miR5049e mature miRNA
• Sequence: 68 - AAUUAUUUAGGUACAGAGGGA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984