miRBase entry: hvu-MIR6198

Stem-loop hvu-MIR6198


Accession
MI0021514
Description
Hordeum vulgare hvu-MIR6198 precursor miRNA


Sequence

guucucaccgaauauugacgGCUCUGUCUUGGAUGGUCAUUCuguugagagugauaaccagaggagcucaacuucauugguggggguuga
.((((((((((........((((((.(((.((...((((((((....))))))))..)))))))))))........))))))))))....

Structure
---g          auauugac      G   U  AUG        g 
    uucucaccga        gGCUCU UCU GG   GUCAUUCu u
    ||||||||||        |||||| ||| ||   ||||||||  
    gggggugguu        ucgagg aga cc   uagugaga u
aguu          acuucaac      -   -  -aa        g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6198

Accession MIMAT0024824
Description Hordeum vulgare hvu-miR6198 mature miRNA
Sequence 21 - GCUCUGUCUUGGAUGGUCAUUC - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984