Stem-loop hvu-MIR6196

Accession

MI0021512

Description

Hordeum vulgare hvu-MIR6196 precursor miRNA

Sequence

cgagcgauggAGGACGAGGAGAUGGAGAGGAaggugcagcaguaccugcaccgcaagggauuccgccucaccgagcucgcgcugcaggaggagcgcaaccgccucuccaccaccucccucuccgacgucucgcucu
.((((((((((((..((((.(.((((((((..(((((((......)))))))((..((((.......)).))..))..(((((.(....).))))).....)))))))).).))))..)))))).....)))))).

Structure

c      -----      AC    A A        -----------------------------------------------Aa       ca 
 gagcga     uggAGG  GAGG G UGGAGAGG                                                 ggugcag  g
 ||||||     ||||||  |||| | ||||||||                                                 |||||||   
 cucgcu     gccucu  cucc c accucucc                                                 ccacguc  u
u      cugca      cc    a c        gccaacgcgaggaggacgucgcgcucgagccacuccgccuuagggaacg       ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR6196

• Accession: MIMAT0024822
• Description: Hordeum vulgare hvu-miR6196 mature miRNA
• Sequence: 11 - AGGACGAGGAGAUGGAGAGGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984