Stem-loop sequence hvu-MIR5048b

AccessionMI0021507 (change log)
DescriptionHordeum vulgare miR5048b stem-loop
Gene family MIPF0001453; MIR5048
Literature search

4 open access papers mention hvu-MIR5048b
(26 sentences)

Stem-loop 
   -    ac            ggu             ggug    u   u    ---   u   u   u      c       u   -        u    a   --        -ccca        uccaugacuaaaaaaagcaaaaaaguaauaaugggguguuguguucucaca 
5'  ucua  aauauauuugca   uuuaggucuaagu    aaua cga cucu   gaa aua uga aaccuu acaaauu gcu gauuauuu guag gcu  auuauugu     caugcaua                                                   a
    ||||  ||||||||||||   |||||||||||||    |||| ||| ||||   ||| ||| ||| |||||| ||||||| ||| |||||||| |||| |||  ||||||||     ||||||||                                                   a
3'  ggau  uuauaugaacgu   agauccagauuua    uuau guu gaga   cuu uau auu uuggaa uguuuaa uga cuaguaag uauc uga  uaguaaua     guacguau                                                   g
   a    cu            -ac             auug    -   -    acg   c   u   u      -       -   a        u    g   aa        ccuaa        uaguuucguaaguagaaggaaguguucaaaaacaauuugaaaagguagaaa
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Confidence Annotation confidence: not enough data
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Database links

Mature sequence hvu-miR5048b

Accession MIMAT0024817
Sequence

11 -  

uauuugcagguuuuaggucuaa

 - 32

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22489137 "Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing" Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S Int J Mol Sci. 13:2973-2984(2012).