miRBase entry: hvu-MIR6190

Stem-loop hvu-MIR6190


Accession
MI0021505
Description
Hordeum vulgare hvu-MIR6190 precursor miRNA


Sequence

auuauuguuuCGAGGAAAGGAAGAAGCCAUGgauuuuggucucucggcgacggcggccuaacucuugcuggagccugggaaugaacaaggcuuuuuuuucuucuucugucaaauggg
...........(((((((((((((((((.((........((((..(((..((((((........))))))..))).)))).....)).))))))))))).))))))...........

Structure
auuauuguuuC      -           A  gauuuugg    uc   ga      ccu 
           GAGGAA AGGAAGAAGCC UG        ucuc  ggc  cggcgg   a
           |||||| ||||||||||| ||        ||||  |||  ||||||    
           cuucuu uuuuuuuucgg ac        aggg  ccg  gucguu   a
ggguaaacugu      c           a  ---aagua    -u   ag      cuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6190

Accession MIMAT0024815
Description Hordeum vulgare hvu-miR6190 mature miRNA
Sequence 11 - CGAGGAAAGGAAGAAGCCAUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984