miRBase entry: hvu-MIR5049d

Stem-loop hvu-MIR5049d


Accession
MI0021503
Description
Hordeum vulgare hvu-MIR5049d precursor miRNA
Gene family
MIPF0001200; MIR5067

Literature search
2 open access papers mention hvu-MIR5049d
(4 sentences)

Sequence

auucuacuuccucuguaccaaaauaauugcaguuggagagaaauagacuaguauuucuccccaacUACAAUUAUUUAGGAACGGAGggagaauuuu
......((((((((((.((.(((((((((.((((((.((((((((......)))))))).)))))).))))))))).)).))))))))))......

Structure
auucua          a  a         c      a        ga 
      cuuccucugu cc aaauaauug aguugg gagaaaua  c
      |||||||||| || ||||||||| |||||| ||||||||   
      gaggGAGGCA GG UUUAUUAAC Ucaacc cucuuuau  u
uuuuaa          A  A         A      c        ga 


Annotation confidence Not enough data
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Genome context
BACC01005699.1: 5031-5126 [-]

Database links

Mature hvu-miR5049d

Accession MIMAT0024813
Description Hordeum vulgare hvu-miR5049d mature miRNA
Sequence 66 - UACAAUUAUUUAGGAACGGAG - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984