miRBase entry: hvu-MIR6180

Stem-loop hvu-MIR6180


Accession
MI0021494
Description
Hordeum vulgare hvu-MIR6180 precursor miRNA


Sequence

ggaaacugAGGGUGGAAGAAAGAGGGCGgcagccgggcugggcaggaggaagaaagaaacaaccccauccaccgcccgcuccuucuuacucccuuccc
(((.....((((.(..((((((.((((((..(((......))).(((((...............)).))).)))))).))..))))..).))))))).

Structure
-   aacug    U GA    --  A      cagccgggcugggca   -  aagaaa 
 gga     AGGG G  AGAA  AG GGGCGg               gga gg      g
 |||     |||| |  ||||  || ||||||               ||| ||      a
 ccu     uccc c  ucuu  uc cccgcc               ccu cc      a
c   -----    u au    cc  g      --------------a   a  ccaaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6180

Accession MIMAT0024804
Description Hordeum vulgare hvu-miR6180 mature miRNA
Sequence 9 - AGGGUGGAAGAAAGAGGGCG - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984