miRBase entry: hvu-MIR5049b

Stem-loop hvu-MIR5049b


Accession
MI0021487
Description
Hordeum vulgare hvu-MIR5049b precursor miRNA
Gene family
MIPF0001200; MIR5067

Literature search
2 open access papers mention hvu-MIR5049b
(4 sentences)

Sequence

aucacuauuacucccuguguaucacaauacuuguaguugggggcacuuguauuaguguuccccaccaAGUAUUUAGGUACAGAGGGAGuagnaacuuc
........((((((((.((((((..((((((((..((.(((((((((......))))))))).))))))))))..)))))).))))))))........

Structure
aucacuau        g      ac        ua  u         ug 
        uacucccu uguauc  aauacuug  gu gggggcacu  u
        |||||||| ||||||  ||||||||  || |||||||||   
        auGAGGGA ACAUGG  UUAUGAac  ca cccuuguga  a
cuucaang        G      AU        --  c         uu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature hvu-miR5049b

Accession MIMAT0024797
Description Hordeum vulgare hvu-miR5049b mature miRNA
Sequence 68 - AGUAUUUAGGUACAGAGGGAG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984